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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11403 and 11404 are separated by 320 nucleotides
11404 and 11405 are separated by 368 nucleotides
11405 and 11406 are separated by 101 nucleotides
11406 and 11407 are separated by 1584 nucleotides
mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151,976 to 152,968
11403
mRNA_3036: 11404 - Hypothetical Protein, at 153,289 to 156,377
11404
mRNA_3037: 11405 - Hypothetical Protein, at 156,746 to 157,530
11405
mRNA_3038: 11406 - K19327 ANO10, TMEM16K anoctamin-10, at 157,632 to 160,610
11406
mRNA_3039: 11407 - Hypothetical Protein, at 162,195 to 163,096
11407
Group
Condition
mRNA
_3035
mRNA
_3036
mRNA
_3037
mRNA
_3038
mRNA
_3039
11403
11404
11405
11406
11407
auxotrophy
YNB Glucose
N.D.
-0.1
-0.3
-0.5
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
+0.1
-0.4
-0.5
auxotrophy
Dropout Complete
N.D.
+0.2
-0.2
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
-0.0
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.1
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.0
-0.4
+0.1
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.2
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-0.1
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.0
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
-0.1
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
+0.2
-0.2
+0.2
growth on ypd
YPD
N.D.
+0.1
-0.0
+0.0
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.1
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
+0.3
+0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.2
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.2
-0.1
+0.5
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.3
+0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
+0.4
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.3
+0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
+0.3
+0.0
+0.4
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