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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11405 and 11406 are separated by 101 nucleotides
11406 and 11407 are separated by 1584 nucleotides
11407 and 11408 are separated by 1290 nucleotides
11408 and 11409 are separated by 1271 nucleotides
mRNA_3037: 11405 - Hypothetical Protein, at 156,746 to 157,530
11405
mRNA_3038: 11406 - K19327 ANO10, TMEM16K anoctamin-10, at 157,632 to 160,610
11406
mRNA_3039: 11407 - Hypothetical Protein, at 162,195 to 163,096
11407
mRNA_3040: 11408 - K17275 PLS1 plastin-1, at 164,387 to 167,396
11408
mRNA_3041: 11409 - KOG0252 Inorganic phosphate transporter, at 168,668 to 171,245
11409
Group
Condition
mRNA
_3037
mRNA
_3038
mRNA
_3039
mRNA
_3040
mRNA
_3041
11405
11406
11407
11408
11409
auxotrophy
Dropout Complete
-0.2
-0.4
-0.1
-0.5
-0.1
auxotrophy
YNB Glucose
-0.3
-0.5
+0.0
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.4
-0.5
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.0
-0.1
-0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.0
+0.4
-1.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.5
-0.1
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.3
-0.0
-0.3
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
+0.0
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.2
-0.1
-0.9
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.5
-0.0
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.2
+0.2
+0.2
-0.4
growth on oleic acid
YNB Glucose
+0.2
-0.1
-0.2
+0.2
-0.0
growth on ypd
YPD
-0.0
+0.0
+0.0
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.3
+0.2
-0.1
+0.4
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
+0.3
+0.6
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
+0.1
+0.7
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.1
+0.2
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.4
+0.1
+0.6
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
+0.1
+0.6
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.0
+0.1
+0.4
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.5
+1.0
+0.1
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