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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11406 and 11407 are separated by 1584 nucleotides
11407 and 11408 are separated by 1290 nucleotides
11408 and 11409 are separated by 1271 nucleotides
11409 and 11410 are separated by 1387 nucleotides
mRNA_3038: 11406 - K19327 ANO10, TMEM16K anoctamin-10, at 157,632 to 160,610
11406
mRNA_3039: 11407 - Hypothetical Protein, at 162,195 to 163,096
11407
mRNA_3040: 11408 - K17275 PLS1 plastin-1, at 164,387 to 167,396
11408
mRNA_3041: 11409 - KOG0252 Inorganic phosphate transporter, at 168,668 to 171,245
11409
mRNA_3042: 11410 - KOG0252 Inorganic phosphate transporter, at 172,633 to 175,207
11410
Group
Condition
mRNA
_3038
mRNA
_3039
mRNA
_3040
mRNA
_3041
mRNA
_3042
11406
11407
11408
11409
11410
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.5
-0.1
+0.1
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.4
-1.4
-0.0
-0.2
auxotrophy
Dropout Complete
-0.4
-0.1
-0.5
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
-0.2
-0.3
-0.3
auxotrophy
YNB Glucose
-0.5
+0.0
-0.3
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.1
-0.2
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.1
-0.9
+0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.0
-0.3
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.0
-0.3
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.2
+0.2
-0.4
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.2
+0.2
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.1
+0.7
-0.1
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.0
+0.1
+0.4
-0.0
growth on ypd
YPD
+0.0
+0.0
+0.1
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-0.2
+0.2
-0.2
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
+0.4
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.1
+0.6
+0.4
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.3
+0.6
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
+0.6
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
+0.4
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.5
+1.0
+0.1
-0.1
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