Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11407 and 11408 are separated by 1290 nucleotides
11408 and 11409 are separated by 1271 nucleotides
11409 and 11410 are separated by 1387 nucleotides
11410 and 11411 are separated by 303 nucleotides
mRNA_3039: 11407 - Hypothetical Protein, at 162,195 to 163,096
11407
mRNA_3040: 11408 - K17275 PLS1 plastin-1, at 164,387 to 167,396
11408
mRNA_3041: 11409 - KOG0252 Inorganic phosphate transporter, at 168,668 to 171,245
11409
mRNA_3042: 11410 - KOG0252 Inorganic phosphate transporter, at 172,633 to 175,207
11410
mRNA_3043: 11411 - K18159 NDUFAF1, CIA30 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1, at 175,511 to 176,675
11411
Group
Condition
mRNA
_3039
mRNA
_3040
mRNA
_3041
mRNA
_3042
mRNA
_3043
11407
11408
11409
11410
11411
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-1.4
-0.0
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.1
+0.1
-0.6
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
-0.3
-0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.9
+0.2
+0.0
N.D.
auxotrophy
Dropout Complete
-0.1
-0.5
-0.1
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.3
-0.0
-0.3
N.D.
auxotrophy
YNB Glucose
+0.0
-0.3
+0.2
-0.2
N.D.
growth on oleic acid
YNB Glucose
-0.2
+0.2
-0.0
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
-0.4
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.2
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
+0.3
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.2
+0.2
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.7
-0.1
-0.7
N.D.
growth on ypd
YPD
+0.0
+0.1
+0.1
-0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.4
-0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.1
+0.4
-0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.6
-0.2
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.4
+0.1
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
+0.3
+0.6
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.6
+0.4
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+1.0
+0.1
-0.1
N.D.
remove
mRNA_3039
plot
remove
mRNA_3040
plot
remove
mRNA_3041
remove
mRNA_3042
plot
remove
mRNA_3043
plot