Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11409 and 11410 are separated by 1387 nucleotides11410 and 11411 are separated by 303 nucleotides11411 and 11412 are separated by 1025 nucleotides11412 and 11413 are separated by 1478 nucleotides mRNA_3041: 11409 - KOG0252 Inorganic phosphate transporter, at 168,668 to 171,245 11409 mRNA_3042: 11410 - KOG0252 Inorganic phosphate transporter, at 172,633 to 175,207 11410 mRNA_3043: 11411 - K18159 NDUFAF1, CIA30 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1, at 175,511 to 176,675 11411 mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177,701 to 181,469 11412 mRNA_3045: 11413 - Hypothetical Protein, at 182,948 to 183,820 11413
Group Condition mRNA_3041 mRNA_3042 mRNA_3043 mRNA_3044 mRNA_3045
11409 11410 11411 11412 11413
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.7 N.D. -1.7 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3 N.D. -1.2 +0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. -1.5 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.3 N.D. -0.2 +0.1
auxotrophy YNB Glucose +0.2 -0.2 N.D. -0.7 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.6 N.D. -0.2 -0.0
auxotrophy Dropout Complete -0.1 +0.0 N.D. -0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 N.D. -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 N.D. -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 N.D. +0.2 -0.3
growth on oleic acid YNB Glucose -0.0 -0.2 N.D. -0.3 +0.4
growth on ricinoleic acid YNB Glucose +0.1 -0.1 N.D. -0.4 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.0 N.D. -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 N.D. -0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 N.D. +0.2 +0.2
growth on ypd YPD +0.1 -0.3 N.D. +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 N.D. -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 N.D. +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.0 N.D. +0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 N.D. +0.5 +0.4
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