Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11410 and 11411 are separated by 303 nucleotides11411 and 11412 are separated by 1025 nucleotides11412 and 11413 are separated by 1478 nucleotides11413 and 11414 are separated by 370 nucleotides mRNA_3042: 11410 - KOG0252 Inorganic phosphate transporter, at 172,633 to 175,207 11410 mRNA_3043: 11411 - K18159 NDUFAF1, CIA30 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1, at 175,511 to 176,675 11411 mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177,701 to 181,469 11412 mRNA_3045: 11413 - Hypothetical Protein, at 182,948 to 183,820 11413 mRNA_3046: 11414 - Hypothetical Protein, at 184,191 to 185,834 11414
Group Condition mRNA_3042 mRNA_3043 mRNA_3044 mRNA_3045 mRNA_3046
11410 11411 11412 11413 11414
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 N.D. -1.7 +0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -1.2 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. -1.5 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. -0.2 -0.0 -0.2
auxotrophy YNB Glucose -0.2 N.D. -0.7 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.2 -0.2 -0.3
auxotrophy Dropout Complete +0.0 N.D. -0.4 -0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.4 +0.4 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. +0.2 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. -0.3 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. -0.2 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.2 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.3 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.1 -0.0 -0.1
growth on ypd YPD -0.3 N.D. +0.1 +0.2 -0.1
growth on oleic acid YNB Glucose -0.2 N.D. -0.3 +0.4 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.2 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. +0.5 +0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. +0.4 -0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.0 +0.2 +0.2
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