Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11412 and 11413 are separated by 1478 nucleotides11413 and 11414 are separated by 370 nucleotides11414 and 11415 are separated by 619 nucleotides11415 and 11416 are separated by 393 nucleotides mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177,701 to 181,469 11412 mRNA_3045: 11413 - Hypothetical Protein, at 182,948 to 183,820 11413 mRNA_3046: 11414 - Hypothetical Protein, at 184,191 to 185,834 11414 mRNA_3047: 11415 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 186,454 to 188,264 11415 mRNA_3048: 11416 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 188,658 to 190,471 11416
Group Condition mRNA_3044 mRNA_3045 mRNA_3046 mRNA_3047 mRNA_3048
11412 11413 11414 11415 11416
growth on oleic acid YNB Oleic Acid -1.5 -0.0 +0.2 +0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.7 +0.2 -0.0 +0.4 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.3 -0.4 -0.5 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 +0.2 -0.1 +0.4 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.3 -0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.3 -0.1 +0.2
auxotrophy Dropout Complete -0.4 -0.1 -0.4 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.4 +0.4 -0.6 +0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 -0.2 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 -0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 -0.1 -0.1 -0.1
auxotrophy YNB Glucose -0.7 +0.1 +0.0 +0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.3 +0.2 -0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.4 -0.5 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.2 -0.1 +0.5 +0.0
growth on oleic acid YNB Glucose -0.3 +0.4 +0.1 +0.1 +0.0
growth on ypd YPD +0.1 +0.2 -0.1 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 -0.1 +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 +0.2 +0.3 -0.1
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