Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11415 and 11416 are separated by 393 nucleotides11416 and 11417 are separated by 285 nucleotides11417 and 11418 are separated by 374 nucleotides11418 and 11419 are separated by 667 nucleotides mRNA_3047: 11415 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 186,454 to 188,264 11415 mRNA_3048: 11416 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 188,658 to 190,471 11416 mRNA_3049: 11417 - SUPERFAMILY--SSF50685, at 190,757 to 193,605 11417 mRNA_3050: 11418 - K14430 PHO87_91 phosphate transporter, at 193,980 to 198,261 11418 mRNA_3051: 11419 - Hypothetical Protein, at 198,929 to 201,085 11419
Group Condition mRNA_3047 mRNA_3048 mRNA_3049 mRNA_3050 mRNA_3051
11415 11416 11417 11418 11419
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.1 N.D. N.D. -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. N.D. -0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 N.D. N.D. -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 N.D. N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 N.D. N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.0 N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 N.D. N.D. +0.6
growth on oleic acid YNB Glucose +0.1 +0.0 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 N.D. N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.0 N.D. N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.0 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.0 N.D. N.D. +0.6
growth on ricinoleic acid YNB Glucose +0.3 -0.0 N.D. N.D. +0.4
auxotrophy YNB Glucose +0.4 -0.0 N.D. N.D. +0.3
growth on ypd YPD +0.0 +0.1 N.D. N.D. +0.7
auxotrophy Dropout Complete +0.5 -0.0 N.D. N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.0 N.D. N.D. +0.7
remove
mRNA_3047
plot
remove
mRNA_3048
plot
remove
mRNA_3049
remove
mRNA_3050
plot
remove
mRNA_3051
plot