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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11422 and 11423 are separated by 860 nucleotides
11423 and 11424 are separated by 223 nucleotides
11424 and 11425 are separated by 409 nucleotides
11425 and 11426 are separated by 300 nucleotides
mRNA_3054: 11422 - Hypothetical Protein, at 207,270 to 207,722
11422
mRNA_3055: 11423 - Hypothetical Protein, at 208,583 to 210,185
11423
mRNA_3056: 11424 - K11290 SET, TAF1, I2PP2A template-activating factor I, at 210,409 to 211,861
11424
mRNA_3057: 11425 - K02216 CHK1 serine/threonine-protein kinase Chk1, at 212,271 to 214,660
11425
mRNA_3058: 11426 - Hypothetical Protein, at 214,961 to 216,563
11426
Group
Condition
mRNA
_3054
mRNA
_3055
mRNA
_3056
mRNA
_3057
mRNA
_3058
11422
11423
11424
11425
11426
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
+0.0
+0.1
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.0
+0.1
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.1
+0.0
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.4
+0.1
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.2
+0.2
-0.2
-0.0
auxotrophy
Dropout Complete
+0.2
-0.2
+0.1
+0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
+0.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
-0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.3
-0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.4
-0.3
+0.1
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.4
+0.1
-0.2
+0.0
auxotrophy
YNB Glucose
-0.1
+0.1
+0.0
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.2
+0.2
+0.0
+0.0
growth on oleic acid
YNB Oleic Acid
+0.3
+0.1
+0.2
-0.1
-0.1
growth on oleic acid
YNB Glucose
+0.1
+0.4
+0.1
+0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
+0.5
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
-0.2
-0.1
+0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.4
+0.1
-0.0
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
+0.3
+0.2
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.3
+0.4
-0.0
-0.0
growth on ypd
YPD
+0.7
-0.1
+0.1
+0.4
+0.3
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