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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11423 and 11424 are separated by 223 nucleotides
11424 and 11425 are separated by 409 nucleotides
11425 and 11426 are separated by 300 nucleotides
11426 and 11427 are separated by 1025 nucleotides
mRNA_3055: 11423 - Hypothetical Protein, at 208,583 to 210,185
11423
mRNA_3056: 11424 - K11290 SET, TAF1, I2PP2A template-activating factor I, at 210,409 to 211,861
11424
mRNA_3057: 11425 - K02216 CHK1 serine/threonine-protein kinase Chk1, at 212,271 to 214,660
11425
mRNA_3058: 11426 - Hypothetical Protein, at 214,961 to 216,563
11426
mRNA_3059: 11427 - Hypothetical Protein, at 217,589 to 219,191
11427
Group
Condition
mRNA
_3055
mRNA
_3056
mRNA
_3057
mRNA
_3058
mRNA
_3059
11423
11424
11425
11426
11427
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.2
+0.0
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.1
-0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
+0.0
+0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.2
-0.2
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
+0.1
-0.2
-0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
-0.2
-0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.1
+0.1
-0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.3
+0.1
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.1
-0.0
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.1
-0.2
+0.0
+0.0
auxotrophy
Dropout Complete
-0.2
+0.1
+0.2
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.4
+0.1
-0.0
+0.2
-0.2
growth on oleic acid
YNB Glucose
+0.4
+0.1
+0.0
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
+0.2
+0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
+0.1
+0.1
+0.0
growth on ypd
YPD
-0.1
+0.1
+0.4
+0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.2
-0.1
+0.0
+0.3
auxotrophy
YNB Glucose
+0.1
+0.0
+0.3
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.4
-0.0
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.5
+0.3
+0.0
+0.1
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