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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11425 and 11426 are separated by 300 nucleotides
11426 and 11427 are separated by 1025 nucleotides
11427 and 11428 are separated by 499 nucleotides
11428 and 11429 are separated by 484 nucleotides
mRNA_3057: 11425 - K02216 CHK1 serine/threonine-protein kinase Chk1, at 212,271 to 214,660
11425
mRNA_3058: 11426 - Hypothetical Protein, at 214,961 to 216,563
11426
mRNA_3059: 11427 - Hypothetical Protein, at 217,589 to 219,191
11427
mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219,691 to 221,317
11428
mRNA_3061: 11429 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 221,802 to 224,881
11429
Group
Condition
mRNA
_3057
mRNA
_3058
mRNA
_3059
mRNA
_3060
mRNA
_3061
11425
11426
11427
11428
11429
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.0
-0.4
-0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
-0.3
+0.1
+0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
-0.2
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.1
+0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
+0.0
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.0
-0.1
-0.0
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.2
+0.1
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.3
-0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.0
+0.3
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.2
-0.0
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
+0.0
-0.4
+0.2
growth on oleic acid
YNB Glucose
+0.0
-0.1
+0.0
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.0
-0.1
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.2
-0.2
-0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
-0.2
+0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.0
+0.1
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
+0.1
-0.0
+0.2
auxotrophy
Dropout Complete
+0.2
-0.1
+0.3
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.1
+0.2
+0.1
+0.0
auxotrophy
YNB Glucose
+0.3
-0.0
+0.2
+0.2
+0.0
growth on ypd
YPD
+0.4
+0.3
-0.3
+0.3
+0.0
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