Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11425 and 11426 are separated by 300 nucleotides11426 and 11427 are separated by 1025 nucleotides11427 and 11428 are separated by 499 nucleotides11428 and 11429 are separated by 484 nucleotides mRNA_3057: 11425 - K02216 CHK1 serine/threonine-protein kinase Chk1, at 212,271 to 214,660 11425 mRNA_3058: 11426 - Hypothetical Protein, at 214,961 to 216,563 11426 mRNA_3059: 11427 - Hypothetical Protein, at 217,589 to 219,191 11427 mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219,691 to 221,317 11428 mRNA_3061: 11429 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 221,802 to 224,881 11429
Group Condition mRNA_3057 mRNA_3058 mRNA_3059 mRNA_3060 mRNA_3061
11425 11426 11427 11428 11429
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.0 -0.4 -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.3 +0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.2 +0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.1 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.0 -0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.0 -0.1 -0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 +0.1 -0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.4 -0.3 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.0 +0.3 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 -0.0 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.0 -0.4 +0.2
growth on oleic acid YNB Glucose +0.0 -0.1 +0.0 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.0 -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 -0.2 -0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 -0.2 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.0 +0.1 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 +0.1 -0.0 +0.2
auxotrophy Dropout Complete +0.2 -0.1 +0.3 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.2 +0.1 +0.0
auxotrophy YNB Glucose +0.3 -0.0 +0.2 +0.2 +0.0
growth on ypd YPD +0.4 +0.3 -0.3 +0.3 +0.0
remove
mRNA_3057
plot
remove
mRNA_3058
plot
remove
mRNA_3059
remove
mRNA_3060
plot
remove
mRNA_3061
plot