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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11427 and 11428 are separated by 499 nucleotides
11428 and 11429 are separated by 484 nucleotides
11429 and 11430 are separated by 350 nucleotides
11430 and 11431 are separated by 192 nucleotides
mRNA_3059: 11427 - Hypothetical Protein, at 217,589 to 219,191
11427
mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219,691 to 221,317
11428
mRNA_3061: 11429 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 221,802 to 224,881
11429
mRNA_3062: 11430 - SUPERFAMILY--SSF49899, at 225,232 to 227,100
11430
mRNA_3063: 11431 - Hypothetical Protein, at 227,293 to 229,777
11431
Group
Condition
mRNA
_3059
mRNA
_3060
mRNA
_3061
mRNA
_3062
mRNA
_3063
11427
11428
11429
11430
11431
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.0
+0.0
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.1
+0.2
-0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.3
+0.1
+0.3
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
+0.0
-0.1
-0.2
growth on oleic acid
YNB Glucose
+0.0
+0.1
-0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.0
+0.2
-0.0
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
+0.1
+0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
+0.2
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.2
+0.2
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
+0.2
+0.0
-0.1
growth on ypd
YPD
-0.3
+0.3
+0.0
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.1
+0.1
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.2
+0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.3
+0.2
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
+0.2
-0.1
-0.0
auxotrophy
Dropout Complete
+0.3
-0.1
-0.0
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.1
+0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.0
-0.1
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.1
+0.1
-0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.4
+0.2
+0.2
+0.3
auxotrophy
YNB Glucose
+0.2
+0.2
+0.0
-0.1
+0.2
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