Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11427 and 11428 are separated by 499 nucleotides11428 and 11429 are separated by 484 nucleotides11429 and 11430 are separated by 350 nucleotides11430 and 11431 are separated by 192 nucleotides mRNA_3059: 11427 - Hypothetical Protein, at 217,589 to 219,191 11427 mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219,691 to 221,317 11428 mRNA_3061: 11429 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 221,802 to 224,881 11429 mRNA_3062: 11430 - SUPERFAMILY--SSF49899, at 225,232 to 227,100 11430 mRNA_3063: 11431 - Hypothetical Protein, at 227,293 to 229,777 11431
Group Condition mRNA_3059 mRNA_3060 mRNA_3061 mRNA_3062 mRNA_3063
11427 11428 11429 11430 11431
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.0 +0.0 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 +0.2 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 +0.1 +0.3 -0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.0 -0.1 -0.2
growth on oleic acid YNB Glucose +0.0 +0.1 -0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 +0.2 -0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.2 +0.1 +0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 +0.2 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 +0.2 +0.0 -0.1
growth on ypd YPD -0.3 +0.3 +0.0 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 +0.1 +0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 +0.2 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.3 +0.2 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 +0.2 -0.1 -0.0
auxotrophy Dropout Complete +0.3 -0.1 -0.0 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.0 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.0 -0.1 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 +0.1 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.4 +0.2 +0.2 +0.3
auxotrophy YNB Glucose +0.2 +0.2 +0.0 -0.1 +0.2
remove
mRNA_3059
plot
remove
mRNA_3060
plot
remove
mRNA_3061
remove
mRNA_3062
plot
remove
mRNA_3063
plot