Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11428 and 11429 are separated by 484 nucleotides11429 and 11430 are separated by 350 nucleotides11430 and 11431 are separated by 192 nucleotides11431 and 11432 are separated by 82 nucleotides mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219,691 to 221,317 11428 mRNA_3061: 11429 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 221,802 to 224,881 11429 mRNA_3062: 11430 - SUPERFAMILY--SSF49899, at 225,232 to 227,100 11430 mRNA_3063: 11431 - Hypothetical Protein, at 227,293 to 229,777 11431 mRNA_3064: 11432 - K17617 CTDNEP1, DULLARD, NEM1 CTD nuclear envelope phosphatase 1, at 229,860 to 230,752 11432
Group Condition mRNA_3060 mRNA_3061 mRNA_3062 mRNA_3063 mRNA_3064
11428 11429 11430 11431 11432
auxotrophy Dropout Complete -0.1 -0.0 -0.1 -0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 +0.3 -0.2 -0.5
growth on oleic acid YNB Glucose +0.1 -0.0 -0.2 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 -0.0 -0.1 -0.4
growth on ypd YPD +0.3 +0.0 +0.0 -0.1 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 +0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.0 -0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 +0.3 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 +0.3 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.0 -0.2 -0.2 +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.1 -0.1 -0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.1 -0.2 +0.1
auxotrophy YNB Glucose +0.2 +0.0 -0.1 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.1 -0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 +0.1 +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 +0.2 +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 -0.0 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 -0.1 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.1 -0.2 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 -0.0 -0.2 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 -0.1 -0.0 +0.7
remove
mRNA_3060
plot
remove
mRNA_3061
plot
remove
mRNA_3062
remove
mRNA_3063
plot
remove
mRNA_3064
plot