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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11428 and 11429 are separated by 484 nucleotides
11429 and 11430 are separated by 350 nucleotides
11430 and 11431 are separated by 192 nucleotides
11431 and 11432 are separated by 82 nucleotides
mRNA_3060: 11428 - K13115 CCDC130 coiled-coil domain-containing protein 130, at 219,691 to 221,317
11428
mRNA_3061: 11429 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 221,802 to 224,881
11429
mRNA_3062: 11430 - SUPERFAMILY--SSF49899, at 225,232 to 227,100
11430
mRNA_3063: 11431 - Hypothetical Protein, at 227,293 to 229,777
11431
mRNA_3064: 11432 - K17617 CTDNEP1, DULLARD, NEM1 CTD nuclear envelope phosphatase 1, at 229,860 to 230,752
11432
Group
Condition
mRNA
_3060
mRNA
_3061
mRNA
_3062
mRNA
_3063
mRNA
_3064
11428
11429
11430
11431
11432
auxotrophy
Dropout Complete
-0.1
-0.0
-0.1
-0.0
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
+0.3
-0.2
-0.5
growth on oleic acid
YNB Glucose
+0.1
-0.0
-0.2
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
-0.0
-0.1
-0.4
growth on ypd
YPD
+0.3
+0.0
+0.0
-0.1
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
+0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
+0.0
-0.1
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.1
+0.3
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.2
+0.3
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.0
-0.2
-0.2
+0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
-0.1
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.1
-0.2
+0.1
auxotrophy
YNB Glucose
+0.2
+0.0
-0.1
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
+0.1
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
+0.1
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.2
+0.2
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
-0.0
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.2
-0.1
+0.0
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.2
-0.1
-0.2
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.2
-0.0
-0.2
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
-0.1
-0.0
+0.7
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