Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11432 and 11433 are separated by 52 nucleotides11433 and 11434 are separated by 294 nucleotides11434 and 11435 are separated by 1813 nucleotides11435 and 11436 are separated by 303 nucleotides mRNA_3064: 11432 - K17617 CTDNEP1, DULLARD, NEM1 CTD nuclear envelope phosphatase 1, at 229,860 to 230,752 11432 mRNA_3065: 11433 - Hypothetical Protein, at 230,805 to 232,101 11433 mRNA_3066: 11434 - K13449 PR1 pathogenesis-related protein 1, at 232,396 to 233,465 11434 mRNA_3067: 11435 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 235,279 to 236,676 11435 mRNA_3068: 11436 - K02434 gatB, PET112 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B, at 236,980 to 239,400 11436
Group Condition mRNA_3064 mRNA_3065 mRNA_3066 mRNA_3067 mRNA_3068
11432 11433 11434 11435 11436
growth on ypd YPD -0.7 +0.1 -0.2 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.2 -0.2 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 -0.3 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.4 +0.1 -0.2
auxotrophy Dropout Complete -0.5 -0.3 -0.0 +0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 -0.4 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 +0.1 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 -0.0 -0.4 +0.4
auxotrophy YNB Glucose -0.3 -0.3 +0.3 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.1 -0.1 -0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -0.1 -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 -0.1 -0.1 -0.0
growth on oleic acid YNB Glucose -0.2 +0.1 +0.1 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.1 +0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 +0.5 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 +0.3 +0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.3 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.0 +0.6 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 +0.3 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.1 +0.6 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.4 +0.2 -0.1 -0.1
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