Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11435 and 11436 are separated by 303 nucleotides
11436 and 11437 are separated by 215 nucleotides
11437 and 11438 are separated by 234 nucleotides
11438 and 11439 are separated by 1703 nucleotides
mRNA_3067: 11435 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 235,279 to 236,676
11435
mRNA_3068: 11436 - K02434 gatB, PET112 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B, at 236,980 to 239,400
11436
mRNA_3069: 11437 - KOG2505 Ankyrin repeat protein, at 239,616 to 241,978
11437
mRNA_3070: 11438 - Hypothetical Protein, at 242,213 to 243,874
11438
mRNA_3071: 11439 - Hypothetical Protein, at 245,578 to 247,225
11439
Group
Condition
mRNA
_3067
mRNA
_3068
mRNA
_3069
mRNA
_3070
mRNA
_3071
11435
11436
11437
11438
11439
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.4
-0.1
-0.4
-0.4
growth on ypd
YPD
-0.1
-0.5
-0.0
+0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-0.2
+0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.0
+0.1
-0.3
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
-0.3
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
-0.2
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.2
-0.1
+0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.2
-0.0
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
-0.3
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
-0.1
+0.3
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
+0.0
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.1
+0.5
-0.1
growth on oleic acid
YNB Glucose
-0.1
+0.1
+0.1
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.2
+0.3
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
+0.1
+0.2
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.0
-0.1
+0.4
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
+0.1
+0.3
+0.1
auxotrophy
Dropout Complete
+0.0
+0.2
+0.2
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.2
+0.2
+0.2
+0.1
auxotrophy
YNB Glucose
+0.1
+0.1
+0.2
+0.3
+0.2
remove
mRNA_3067
plot
remove
mRNA_3068
plot
remove
mRNA_3069
remove
mRNA_3070
plot
remove
mRNA_3071
plot