Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11437 and 11438 are separated by 234 nucleotides11438 and 11439 are separated by 1703 nucleotides11439 and 11440 are separated by 976 nucleotides11440 and 11441 are separated by 153 nucleotides mRNA_3069: 11437 - KOG2505 Ankyrin repeat protein, at 239,616 to 241,978 11437 mRNA_3070: 11438 - Hypothetical Protein, at 242,213 to 243,874 11438 mRNA_3071: 11439 - Hypothetical Protein, at 245,578 to 247,225 11439 mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248,202 to 249,247 11440 mRNA_3073: 11441 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 249,401 to 250,160 11441
Group Condition mRNA_3069 mRNA_3070 mRNA_3071 mRNA_3072 mRNA_3073
11437 11438 11439 11440 11441
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.4 -0.4 -0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 -0.2 -0.5 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 +0.0 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 -0.0 -0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 -0.1 +0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 +0.0 -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 +0.1 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 -0.2 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.3 -0.0 -0.2 -0.0
growth on ricinoleic acid YNB Glucose +0.0 -0.2 +0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 -0.2 +0.2 -0.2
growth on oleic acid YNB Oleic Acid +0.2 +0.1 +0.1 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.5 -0.1 +0.1 -0.2
growth on oleic acid YNB Glucose +0.1 +0.1 +0.1 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 +0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 +0.1 +0.1 -0.1
auxotrophy Dropout Complete +0.2 +0.3 -0.0 +0.2 -0.1
growth on ypd YPD -0.0 +0.1 +0.1 +0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.4 +0.3 -0.0 +0.1
auxotrophy YNB Glucose +0.2 +0.3 +0.2 +0.1 -0.0
remove
mRNA_3069
plot
remove
mRNA_3070
plot
remove
mRNA_3071
remove
mRNA_3072
plot
remove
mRNA_3073
plot