Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11439 and 11440 are separated by 976 nucleotides11440 and 11441 are separated by 153 nucleotides11441 and 11442 are separated by 45 nucleotides11442 and 11443 are separated by 218 nucleotides mRNA_3071: 11439 - Hypothetical Protein, at 245,578 to 247,225 11439 mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248,202 to 249,247 11440 mRNA_3073: 11441 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 249,401 to 250,160 11441 mRNA_3074: 11442 - KOG4650 Predicted steroid reductase, at 250,206 to 251,968 11442 mRNA_3075: 11443 - K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK, at 252,187 to 260,484 11443
Group Condition mRNA_3071 mRNA_3072 mRNA_3073 mRNA_3074 mRNA_3075
11439 11440 11441 11442 11443
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 -0.2 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -0.4 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.1 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.3 +0.3 +0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.2 -0.4 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 +0.1 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 -0.2 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.3 +0.2 -0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 -0.0 +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 -0.0 +0.1 +0.0
growth on oleic acid YNB Glucose +0.1 +0.2 -0.2 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 -0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 -0.0 +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.1 +0.1 +0.2
auxotrophy Dropout Complete -0.0 +0.2 -0.1 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.0 +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.0 +0.1 +0.0 +0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.1 +0.1 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 +0.1 +0.1 +0.3
auxotrophy YNB Glucose +0.2 +0.1 -0.0 +0.3 +0.1
growth on ypd YPD +0.1 +0.3 +0.1 +0.2 +0.1
remove
mRNA_3071
plot
remove
mRNA_3072
plot
remove
mRNA_3073
remove
mRNA_3074
plot
remove
mRNA_3075
plot