Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11441 and 11442 are separated by 45 nucleotides
11442 and 11443 are separated by 218 nucleotides
11443 and 11444 are separated by 1326 nucleotides
11444 and 11445 are separated by 29 nucleotides
mRNA_3073: 11441 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 249,401 to 250,160
11441
mRNA_3074: 11442 - KOG4650 Predicted steroid reductase, at 250,206 to 251,968
11442
mRNA_3075: 11443 - K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK, at 252,187 to 260,484
11443
mRNA_3076: 11444 - KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats, at 261,811 to 264,179
11444
mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264,209 to 265,729
11445
Group
Condition
mRNA
_3073
mRNA
_3074
mRNA
_3075
mRNA
_3076
mRNA
_3077
11441
11442
11443
11444
11445
growth on oleic acid
YNB Oleic Acid
-0.4
-0.0
+0.1
-0.0
+0.0
growth on oleic acid
YNB Glucose
-0.2
+0.1
+0.0
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
+0.0
-0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.0
+0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.2
-0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.0
+0.2
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
+0.2
+0.0
-0.1
auxotrophy
Dropout Complete
-0.1
+0.1
+0.2
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.1
+0.0
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.0
+0.1
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.2
+0.2
-0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.0
-0.0
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.3
+0.1
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
+0.0
+0.3
-0.1
growth on ypd
YPD
+0.1
+0.2
+0.1
+0.1
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.2
+0.0
+0.1
auxotrophy
YNB Glucose
-0.0
+0.3
+0.1
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.2
+0.1
+0.5
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.1
+0.3
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
+0.1
+0.3
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.5
+0.1
+0.2
+0.1
remove
mRNA_3073
plot
remove
mRNA_3074
plot
remove
mRNA_3075
remove
mRNA_3076
plot
remove
mRNA_3077
plot