Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11444 and 11445 are separated by 29 nucleotides11445 and 11446 are separated by 175 nucleotides11446 and 11447 are separated by 384 nucleotides11447 and 11448 are separated by 272 nucleotides mRNA_3076: 11444 - KOG4497 Uncharacterized conserved protein WDR8, contains WD repeats, at 261,811 to 264,179 11444 mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264,209 to 265,729 11445 mRNA_3078: 11446 - K01613 psd, PISD phosphatidylserine decarboxylase, at 265,905 to 270,528 11446 mRNA_3079: 11447 - HMMPfam-DNA polymerase Ligase (LigD)-PF13298, at 270,913 to 272,289 11447 mRNA_3080: 11448 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 272,562 to 274,087 11448
Group Condition mRNA_3076 mRNA_3077 mRNA_3078 mRNA_3079 mRNA_3080
11444 11445 11446 11447 11448
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 +0.2 -0.6 +0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.0 -0.1 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.2 -0.0 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 +0.0 -0.3 +0.2
growth on oleic acid YNB Glucose -0.2 -0.0 +0.0 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 -0.1 +0.2 -0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.1 -0.0 -0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.0 +0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 -0.0 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 -0.1 +0.2 +0.2
auxotrophy Dropout Complete +0.1 -0.1 -0.1 +0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 -0.0 +0.2 +0.2
auxotrophy YNB Glucose +0.2 -0.1 -0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 +0.0 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.1 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 +0.2 -0.0 +0.1
growth on ypd YPD +0.1 -0.0 +0.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 -0.1 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.0 +0.3 -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 +0.2 +0.1 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.5 +0.0 +0.1 +0.3
remove
mRNA_3076
plot
remove
mRNA_3077
plot
remove
mRNA_3078
remove
mRNA_3079
plot
remove
mRNA_3080
plot