Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11445 and 11446 are separated by 175 nucleotides11446 and 11447 are separated by 384 nucleotides11447 and 11448 are separated by 272 nucleotides11448 and 11449 are separated by 691 nucleotides mRNA_3077: 11445 - K07542 PIGV phosphatidylinositol glycan, class V, at 264,209 to 265,729 11445 mRNA_3078: 11446 - K01613 psd, PISD phosphatidylserine decarboxylase, at 265,905 to 270,528 11446 mRNA_3079: 11447 - HMMPfam-DNA polymerase Ligase (LigD)-PF13298, at 270,913 to 272,289 11447 mRNA_3080: 11448 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 272,562 to 274,087 11448 mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274,779 to 278,054 11449
Group Condition mRNA_3077 mRNA_3078 mRNA_3079 mRNA_3080 mRNA_3081
11445 11446 11447 11448 11449
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 -0.6 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.1 -0.0 -0.3 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.0 -0.3 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.2 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 -0.2 -0.1 +0.1
growth on oleic acid YNB Glucose -0.0 +0.0 +0.2 -0.1 -0.0
auxotrophy YNB Glucose -0.1 -0.1 +0.2 +0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 +0.2 +0.2 -0.1
auxotrophy Dropout Complete -0.1 -0.1 +0.2 +0.3 -0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.0 -0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.3 -0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 +0.1 +0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 -0.3 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 +0.2 +0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.2 +0.4 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.0 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.0 +0.1 +0.3 -0.1
growth on ypd YPD -0.0 +0.1 +0.4 +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 +0.1 +0.5 +0.3
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