Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11446 and 11447 are separated by 384 nucleotides11447 and 11448 are separated by 272 nucleotides11448 and 11449 are separated by 691 nucleotides11449 and 11450 are separated by 386 nucleotides mRNA_3078: 11446 - K01613 psd, PISD phosphatidylserine decarboxylase, at 265,905 to 270,528 11446 mRNA_3079: 11447 - HMMPfam-DNA polymerase Ligase (LigD)-PF13298, at 270,913 to 272,289 11447 mRNA_3080: 11448 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 272,562 to 274,087 11448 mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274,779 to 278,054 11449 mRNA_3082: 11450 - K09510 DNAJB4 DnaJ homolog subfamily B member 4, at 278,441 to 278,932 11450
Group Condition mRNA_3078 mRNA_3079 mRNA_3080 mRNA_3081 mRNA_3082
11446 11447 11448 11449 11450
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.3 +0.2 -0.1 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.1 +0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.6 +0.1 +0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 -0.2 -0.0 -0.3
growth on ricinoleic acid YNB Glucose -0.0 -0.2 +0.3 +0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 +0.3 -0.1 -0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.0 -0.3 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.0 -0.0 +0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 +0.2 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 +0.2 -0.1 -0.2
auxotrophy YNB Glucose -0.1 +0.2 +0.2 +0.0 -0.2
growth on oleic acid YNB Glucose +0.0 +0.2 -0.1 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.2 +0.2 -0.0 -0.1
auxotrophy Dropout Complete -0.1 +0.2 +0.3 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.0 +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 +0.3 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.4 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 +0.1 +0.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 +0.5 +0.3 -0.3
growth on ypd YPD +0.1 +0.4 +0.2 +0.2 +0.1
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