Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11448 and 11449 are separated by 691 nucleotides11449 and 11450 are separated by 386 nucleotides11450 and 11451 are separated by 2093 nucleotides11451 and 11452 are separated by 123 nucleotides mRNA_3080: 11448 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 272,562 to 274,087 11448 mRNA_3081: 11449 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 274,779 to 278,054 11449 mRNA_3082: 11450 - K09510 DNAJB4 DnaJ homolog subfamily B member 4, at 278,441 to 278,932 11450 mRNA_3083: 11451 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959, at 281,026 to 282,865 11451 mRNA_3084: 11452 - Hypothetical Protein, at 282,989 to 283,312 11452
Group Condition mRNA_3080 mRNA_3081 mRNA_3082 mRNA_3083 mRNA_3084
11448 11449 11450 11451 11452
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.6 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.3 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 -0.5 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 -0.3 +0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 -0.7 +0.1 +0.1
auxotrophy YNB Glucose +0.2 +0.0 -0.2 -0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.2 -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.0 +0.2 -0.0 -0.2
growth on oleic acid YNB Glucose -0.1 -0.0 -0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.1 -0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 -0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.0 +0.3 -0.2 -0.3
growth on ricinoleic acid YNB Glucose +0.3 +0.1 -0.5 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 -0.4 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 -0.1 +0.0 -0.1
auxotrophy Dropout Complete +0.3 -0.1 +0.1 -0.0 -0.2
growth on ypd YPD +0.2 +0.2 +0.1 +0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.3 -0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.1 +0.1 -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.4 -0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 +0.2 +0.0 +0.3
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