Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11457 and 11458 are separated by 498 nucleotides11458 and 11459 overlap by 84 nucleotides11459 and 11460 are separated by 614 nucleotides11460 and 11461 are separated by 370 nucleotides mRNA_3089: 11457 - BLAST Rho GTPase-activating protein 30 [Larimichthys crocea], at 293,855 to 294,427 11457 mRNA_3090: 11458 - K03062 PSMC1, RPT2 26S proteasome regulatory subunit T2, at 294,926 to 296,826 11458 mRNA_3091: 11459 - K13303 SGK2 serum/glucocorticoid-regulated kinase 2, at 296,743 to 299,433 11459 mRNA_3092: 11460 - KOG4784 Uncharacterized conserved protein, at 300,048 to 303,992 11460 mRNA_3093: 11461 - Hypothetical Protein, at 304,363 to 305,282 11461
Group Condition mRNA_3089 mRNA_3090 mRNA_3091 mRNA_3092 mRNA_3093
11457 11458 11459 11460 11461
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 +0.1 +0.1 +0.3 -0.0
growth on ypd YPD -0.3 -0.4 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.1 +0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 +0.3 -0.1 +0.2
growth on oleic acid YNB Glucose +0.2 -0.1 -0.0 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 -0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 +0.2 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.0 -0.0 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 +0.4 +0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.2 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 -0.1 +0.4 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 -0.0 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.2 +0.1 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.0 -0.1 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 +0.4 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.3 +0.3 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.3 -0.2 -0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.4 +0.1 +0.1 +0.0
auxotrophy YNB Glucose +0.0 +0.5 +0.3 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 +0.5 +0.1 +0.1
auxotrophy Dropout Complete +0.4 +0.4 +0.3 -0.1 +0.1
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