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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11459 and 11460 are separated by 614 nucleotides
11460 and 11461 are separated by 370 nucleotides
11461 and 11462 are separated by 328 nucleotides
11462 and 11463 are separated by 232 nucleotides
mRNA_3091: 11459 - K13303 SGK2 serum/glucocorticoid-regulated kinase 2, at 296,743 to 299,433
11459
mRNA_3092: 11460 - KOG4784 Uncharacterized conserved protein, at 300,048 to 303,992
11460
mRNA_3093: 11461 - Hypothetical Protein, at 304,363 to 305,282
11461
mRNA_3094: 11462 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 305,611 to 307,227
11462
mRNA_3095: 11463 - K01739 metB cystathionine gamma-synthase, at 307,460 to 310,020
11463
Group
Condition
mRNA
_3091
mRNA
_3092
mRNA
_3093
mRNA
_3094
mRNA
_3095
11459
11460
11461
11462
11463
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
+0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.0
-0.1
-0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.1
-0.0
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.0
-0.1
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.1
+0.0
-0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.0
+0.2
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.1
+0.2
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.1
+0.2
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
+0.0
-0.1
+0.1
auxotrophy
Dropout Complete
+0.3
-0.1
+0.1
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.2
+0.1
+0.0
-0.0
growth on ypd
YPD
-0.1
+0.1
+0.1
-0.0
+0.1
auxotrophy
YNB Glucose
+0.3
+0.1
-0.0
-0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.2
+0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.1
+0.1
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
-0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
-0.0
+0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.4
+0.0
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.0
-0.0
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.1
-0.1
-0.1
+0.1
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