Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11460 and 11461 are separated by 370 nucleotides11461 and 11462 are separated by 328 nucleotides11462 and 11463 are separated by 232 nucleotides11463 and 11464 are separated by 251 nucleotides mRNA_3092: 11460 - KOG4784 Uncharacterized conserved protein, at 300,048 to 303,992 11460 mRNA_3093: 11461 - Hypothetical Protein, at 304,363 to 305,282 11461 mRNA_3094: 11462 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 305,611 to 307,227 11462 mRNA_3095: 11463 - K01739 metB cystathionine gamma-synthase, at 307,460 to 310,020 11463 mRNA_3096: 11464 - K17262 TBCB, CKAP1, ALF1 tubulin-folding cofactor B, at 310,272 to 311,367 11464
Group Condition mRNA_3092 mRNA_3093 mRNA_3094 mRNA_3095 mRNA_3096
11460 11461 11462 11463 11464
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 -0.2 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 -0.2 -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.2 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.1 +0.1 -0.2
growth on oleic acid YNB Glucose -0.1 -0.0 -0.2 -0.0 -0.0
auxotrophy Dropout Complete -0.1 +0.1 -0.1 -0.1 -0.0
auxotrophy YNB Glucose +0.1 -0.0 -0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.1 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.2 +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.3 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 +0.1 -0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.2 -0.2 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.1 +0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.1 +0.1 -0.0
growth on ricinoleic acid YNB Glucose +0.1 -0.0 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.0 +0.1 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.1 -0.1 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.0 -0.0 +0.1
growth on ypd YPD +0.1 +0.1 -0.0 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 +0.0 -0.1 +0.2
remove
mRNA_3092
plot
remove
mRNA_3093
plot
remove
mRNA_3094
remove
mRNA_3095
plot
remove
mRNA_3096
plot