Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11465 and 11466 are separated by 198 nucleotides11466 and 11467 are separated by 60 nucleotides11467 and 11468 are separated by 2722 nucleotides11468 and 11469 are separated by 2163 nucleotides mRNA_3097: 11465 - K00591 COQ3 polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase, at 311,599 to 312,739 11465 mRNA_3098: 11466 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 312,938 to 315,396 11466 mRNA_3099: 11467 - Hypothetical Protein, at 315,457 to 316,238 11467 mRNA_3100: 11468 - Hypothetical Protein, at 318,961 to 319,575 11468 mRNA_3101: 11469 - K01490 AMPD AMP deaminase, at 321,739 to 325,524 11469
Group Condition mRNA_3097 mRNA_3098 mRNA_3099 mRNA_3100 mRNA_3101
11465 11466 11467 11468 11469
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -0.8 -0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.2 -0.1 +0.0 -0.1
growth on ypd YPD -0.3 -0.3 +0.3 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.1 +0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.4 -0.1 -0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2 +0.2 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.3 +0.2 -0.2 -0.1
growth on oleic acid YNB Glucose -0.4 +0.3 +0.4 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.2 +0.2 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 +0.4 +0.1 -0.1
auxotrophy YNB Glucose -0.4 -0.1 +0.4 +0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 +0.3 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 +0.0 -0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.3 +0.4 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 +0.4 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 +0.6 +0.0 +0.0
auxotrophy Dropout Complete -0.1 -0.1 +0.3 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 +0.6 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 +0.6 +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 +0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 +0.5 +0.2 +0.2
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