Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11469 and 11470 are separated by 222 nucleotides11470 and 11471 are separated by 586 nucleotides11471 and 11472 are separated by 565 nucleotides11472 and 11473 are separated by 1214 nucleotides mRNA_3101: 11469 - K01490 AMPD AMP deaminase, at 321,739 to 325,524 11469 mRNA_3102: 11470 - BLAST mannoprotein [Rhizoctonia solani AG-1 IA], at 325,747 to 328,243 11470 mRNA_3103: 11471 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 328,830 to 331,254 11471 mRNA_3104: 11472 - HMMPfam-Uncharacterized conserved protein (DUF2156)-PF09924, at 331,820 to 333,279 11472 mRNA_3105: 11473 - KOG1515 Arylacetamide deacetylase, at 334,494 to 336,059 11473
Group Condition mRNA_3101 mRNA_3102 mRNA_3103 mRNA_3104 mRNA_3105
11469 11470 11471 11472 11473
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.2 -0.2 -0.0
auxotrophy YNB Glucose +0.0 -0.1 -0.1 +0.2 -0.5
growth on oleic acid YNB Glucose -0.1 -0.2 -0.2 -0.1 -0.1
growth on ypd YPD -0.1 -0.0 -0.3 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.0 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -0.1 -0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.0 +0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.2 -0.0 +0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 +0.1 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 +0.2 -0.3 +0.5
growth on ricinoleic acid YNB Glucose -0.2 -0.1 +0.1 -0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 +0.1 +0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.1 +0.2 -0.1
auxotrophy Dropout Complete +0.2 -0.1 +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.0 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +0.2 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 -0.2 +0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.0 +0.0 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.1 +0.0 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 +0.2 +0.1 -0.1
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