Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11471 and 11472 are separated by 565 nucleotides11472 and 11473 are separated by 1214 nucleotides11473 and 11474 are separated by 151 nucleotides11474 and 11475 are separated by 396 nucleotides mRNA_3103: 11471 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 328,830 to 331,254 11471 mRNA_3104: 11472 - HMMPfam-Uncharacterized conserved protein (DUF2156)-PF09924, at 331,820 to 333,279 11472 mRNA_3105: 11473 - KOG1515 Arylacetamide deacetylase, at 334,494 to 336,059 11473 mRNA_3106: 11474 - BLAST potential peroxisomal matrix Pex8 protein [Pseudo..., at 336,211 to 338,758 11474 mRNA_3107: 11475 - K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2, at 339,155 to 340,730 11475
Group Condition mRNA_3103 mRNA_3104 mRNA_3105 mRNA_3106 mRNA_3107
11471 11472 11473 11474 11475
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.1 -0.4 +0.4 -2.0
growth on ypd YPD -0.3 +0.0 -0.1 -0.1 +0.1
growth on oleic acid YNB Glucose -0.2 -0.1 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.2 +0.1 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 -0.2 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.2 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.2 +0.3 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 +0.0 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 +0.1 -0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.1 -0.0 -0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.0 +0.3 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.2 -0.0 +0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 +0.4 -0.1 +0.2
auxotrophy YNB Glucose -0.1 +0.2 -0.5 -0.0 +0.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 +0.1 +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 +0.5 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 +0.4 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 -0.1 -0.0 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 -0.2 +0.0 +0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.0 +0.1 +0.8
auxotrophy Dropout Complete +0.1 +0.2 -0.1 -0.1 +1.0
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