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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11476 and 11477 are separated by 214 nucleotides
11477 and 11478 are separated by 153 nucleotides
11478 and 11479 are separated by 276 nucleotides
11479 and 11480 are separated by 179 nucleotides
mRNA_3108: 11476 - KOG2203 GTP-binding protein, at 340,842 to 344,399
11476
mRNA_3109: 11477 - K13172 SRRM2, SRM300 serine/arginine repetitive matrix protein 2, at 344,614 to 345,945
11477
mRNA_3110: 11478 - K14558 PWP2, UTP1 periodic tryptophan protein 2, at 346,099 to 349,205
11478
mRNA_3111: 11479 - K09788 prpF 2-methylaconitate isomerase, at 349,482 to 350,899
11479
mRNA_3112: 11480 - Hypothetical Protein, at 351,079 to 352,331
11480
Group
Condition
mRNA
_3108
mRNA
_3109
mRNA
_3110
mRNA
_3111
mRNA
_3112
11476
11477
11478
11479
11480
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.1
-0.0
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
-0.3
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
-0.0
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.0
-0.1
-0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.0
-0.1
+0.1
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
-0.3
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.0
-0.0
-0.0
+0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
-0.2
-0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.1
-0.1
+0.0
-0.1
growth on ypd
YPD
-0.1
+0.4
+0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.4
-0.2
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
-0.2
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
-0.0
-0.1
-0.1
auxotrophy
YNB Glucose
+0.0
+0.1
-0.0
-0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
-0.0
+0.1
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.3
-0.0
+0.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.0
-0.0
+0.1
+0.6
auxotrophy
Dropout Complete
+0.0
+0.2
+0.0
+0.2
+0.5
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