Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11476 and 11477 are separated by 214 nucleotides11477 and 11478 are separated by 153 nucleotides11478 and 11479 are separated by 276 nucleotides11479 and 11480 are separated by 179 nucleotides mRNA_3108: 11476 - KOG2203 GTP-binding protein, at 340,842 to 344,399 11476 mRNA_3109: 11477 - K13172 SRRM2, SRM300 serine/arginine repetitive matrix protein 2, at 344,614 to 345,945 11477 mRNA_3110: 11478 - K14558 PWP2, UTP1 periodic tryptophan protein 2, at 346,099 to 349,205 11478 mRNA_3111: 11479 - K09788 prpF 2-methylaconitate isomerase, at 349,482 to 350,899 11479 mRNA_3112: 11480 - Hypothetical Protein, at 351,079 to 352,331 11480
Group Condition mRNA_3108 mRNA_3109 mRNA_3110 mRNA_3111 mRNA_3112
11476 11477 11478 11479 11480
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 -0.3 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.0 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.0 -0.1 -0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 +0.0 -0.1 +0.1
growth on oleic acid YNB Glucose -0.1 +0.1 -0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 -0.3 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.0 -0.0 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 -0.2 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -0.1 +0.0 -0.1
growth on ypd YPD -0.1 +0.4 +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 -0.2 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 -0.1 -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.1 +0.4 -0.2 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 -0.0 -0.1 -0.1
auxotrophy YNB Glucose +0.0 +0.1 -0.0 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 -0.0 +0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 -0.0 +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 -0.0 +0.1 +0.6
auxotrophy Dropout Complete +0.0 +0.2 +0.0 +0.2 +0.5
remove
mRNA_3108
plot
remove
mRNA_3109
plot
remove
mRNA_3110
remove
mRNA_3111
plot
remove
mRNA_3112
plot