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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11480 and 11481 are separated by 383 nucleotides
11481 and 11482 are separated by 449 nucleotides
11482 and 11483 are separated by 282 nucleotides
11483 and 11484 are separated by 88 nucleotides
mRNA_3112: 11480 - Hypothetical Protein, at 351,079 to 352,331
11480
mRNA_3113: 11481 - K11361 SPT20, ADA5 transcription factor SPT20, at 352,715 to 353,874
11481
mRNA_3114: 11482 - BLAST c6 zinc finger domain containing protein [Diplodia co..., at 354,324 to 355,899
11482
mRNA_3115: 11483 - Hypothetical Protein, at 356,182 to 356,910
11483
mRNA_3116: 11484 - BLAST Pogo transposable element [Larimichthys crocea], at 356,999 to 357,616
11484
Group
Condition
mRNA
_3112
mRNA
_3113
mRNA
_3114
mRNA
_3115
mRNA
_3116
11480
11481
11482
11483
11484
growth on ypd
YPD
-0.3
-0.3
-0.2
+0.2
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
+0.4
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.4
-0.1
+0.4
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.1
+0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
-0.5
+0.1
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
+0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.2
-0.7
+0.1
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
+0.2
+0.0
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
+0.5
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.3
+0.3
+0.5
growth on ricinoleic acid
YNB Glucose
+0.1
+0.0
-0.2
+0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
-0.5
+0.6
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.0
+0.2
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
+0.1
+0.1
+0.5
auxotrophy
Dropout Complete
+0.5
-0.3
-0.5
+0.3
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.2
+0.3
+0.2
+0.1
auxotrophy
YNB Glucose
+0.5
-0.2
-0.5
+0.5
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.2
-0.5
+0.3
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.5
-0.3
+0.1
+0.9
growth on oleic acid
YNB Glucose
-0.1
-0.0
+0.2
+0.6
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.4
+1.0
+0.1
+0.2
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