Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11484 and 11485 are separated by 134 nucleotides11485 and 11486 are separated by 581 nucleotides11486 and 11487 are separated by 659 nucleotides11487 and 11488 are separated by 332 nucleotides mRNA_3116: 11484 - BLAST Pogo transposable element [Larimichthys crocea], at 356,999 to 357,616 11484 mRNA_3117: 11485 - KOG1110 Putative steroid membrane receptor Hpr6.6/25-Dx, at 357,751 to 358,834 11485 mRNA_3118: 11486 - K01881 PARS, proS prolyl-tRNA synthetase, at 359,416 to 362,125 11486 mRNA_3119: 11487 - BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus], at 362,785 to 367,104 11487 mRNA_3120: 11488 - BLAST Protein cps3 [Rhizoctonia solani], at 367,437 to 369,368 11488
Group Condition mRNA_3116 mRNA_3117 mRNA_3118 mRNA_3119 mRNA_3120
11484 11485 11486 11487 11488
growth on ypd YPD -0.4 -0.1 -0.0 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.3 -0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.0 -0.1 +0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 +0.0 -0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.0 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.1 -0.1 -0.2
auxotrophy YNB Glucose +0.4 +0.1 -0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.1 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.5 -0.1 -0.0 -0.2
auxotrophy Dropout Complete +0.5 -0.1 -0.2 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.2 -0.1 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 +0.3 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.9 -0.1 -0.2 -0.1 -0.2
growth on oleic acid YNB Glucose +0.2 +0.2 -0.0 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.0 +0.1 +0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 +0.3 +0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.0 +0.5 +0.1 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.4 -0.1 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.1 +0.1 -0.0 +0.3
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