Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11486 and 11487 are separated by 659 nucleotides11487 and 11488 are separated by 332 nucleotides11488 and 11489 are separated by 9 nucleotides11489 and 11490 are separated by 520 nucleotides mRNA_3118: 11486 - K01881 PARS, proS prolyl-tRNA synthetase, at 359,416 to 362,125 11486 mRNA_3119: 11487 - BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus], at 362,785 to 367,104 11487 mRNA_3120: 11488 - BLAST Protein cps3 [Rhizoctonia solani], at 367,437 to 369,368 11488 mRNA_3121: 11489 - KOG1039 Predicted E3 ubiquitin ligase, at 369,378 to 369,678 11489 mRNA_3122: 11490 - K05290 PIGK phosphatidylinositol glycan, class K, at 370,199 to 371,731 11490
Group Condition mRNA_3118 mRNA_3119 mRNA_3120 mRNA_3121 mRNA_3122
11486 11487 11488 11489 11490
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 -0.2 -1.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 -0.2 -1.4 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.0 -0.2 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 -0.3 -0.5 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 -0.0 -0.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 -0.5 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 +0.3 -0.7 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.1 +0.3 -0.8 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 +0.1 -0.4 +0.0
growth on oleic acid YNB Glucose -0.0 +0.1 -0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 +0.1 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.0 +0.1 -0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.0 -0.1 +0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 +0.2 +0.2 +0.1
auxotrophy YNB Glucose -0.2 -0.1 -0.1 +0.7 +0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.1 +0.1 +0.4 -0.0
auxotrophy Dropout Complete -0.2 +0.1 -0.1 +0.7 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.2 +1.3 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -0.1 +1.3 +0.2
growth on ypd YPD -0.0 -0.0 -0.1 +1.3 +0.7
remove
mRNA_3118
plot
remove
mRNA_3119
plot
remove
mRNA_3120
remove
mRNA_3121
plot
remove
mRNA_3122
plot