Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11487 and 11488 are separated by 332 nucleotides11488 and 11489 are separated by 9 nucleotides11489 and 11490 are separated by 520 nucleotides11490 and 11491 are separated by 122 nucleotides mRNA_3119: 11487 - BLAST Spindle pole body protein pcp1 [Hypsizygus marmoreus], at 362,785 to 367,104 11487 mRNA_3120: 11488 - BLAST Protein cps3 [Rhizoctonia solani], at 367,437 to 369,368 11488 mRNA_3121: 11489 - KOG1039 Predicted E3 ubiquitin ligase, at 369,378 to 369,678 11489 mRNA_3122: 11490 - K05290 PIGK phosphatidylinositol glycan, class K, at 370,199 to 371,731 11490 mRNA_3123: 11491 - HMMPfam-Ribosomal RNA adenine dimethylase-PF00398,SUPERFAMILY--SSF53335, at 371,854 to 373,401 11491
Group Condition mRNA_3119 mRNA_3120 mRNA_3121 mRNA_3122 mRNA_3123
11487 11488 11489 11490 11491
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 -1.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -1.4 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 -0.5 -0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 -0.6 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.3 -0.8 -0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.0 -0.8 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.3 -0.7 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.4 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.5 +0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.1 +0.1
growth on oleic acid YNB Glucose +0.1 -0.1 -0.1 -0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 -0.0 -0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.1 +0.4 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 +0.2 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.1 -0.0 +0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +0.4 -0.0 +0.2
auxotrophy YNB Glucose -0.1 -0.1 +0.7 +0.1 +0.1
auxotrophy Dropout Complete +0.1 -0.1 +0.7 +0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +1.3 +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 +1.3 +0.2 -0.0
growth on ypd YPD -0.0 -0.1 +1.3 +0.7 -0.1
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