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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11492 and 11493 are separated by 536 nucleotides
11493 and 11494 are separated by 1176 nucleotides
11494 and 11495 are separated by 27 nucleotides
11495 and 11496 are separated by 89 nucleotides
mRNA_3124: 11492 - K04079 HSP90A, htpG molecular chaperone HtpG, at 373,558 to 376,751
11492
mRNA_3125: 11493 - K08145 SLC2A8, GLUT8 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8, at 377,288 to 379,485
11493
mRNA_3126: 11494 - KOG0019 Molecular chaperone (HSP90 family), at 380,662 to 381,306
11494
mRNA_3127: 11495 - K11984 SART1, HAF, SNU66 U4/U6.U5 tri-snRNP-associated protein 1, at 381,334 to 384,253
11495
mRNA_3128: 11496 - BLAST protein transporter [Pseudozyma hubeiensis SY62], at 384,343 to 385,202
11496
Group
Condition
mRNA
_3124
mRNA
_3125
mRNA
_3126
mRNA
_3127
mRNA
_3128
11492
11493
11494
11495
11496
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.2
-0.1
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.2
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.5
-0.0
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.1
+0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.4
-0.1
+0.1
-0.1
growth on oleic acid
YNB Glucose
-0.1
+0.2
-0.1
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.1
-0.3
-0.2
-0.2
auxotrophy
YNB Glucose
-0.1
+0.1
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
-0.1
-0.2
-0.2
auxotrophy
Dropout Complete
-0.0
+0.1
+0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.3
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.1
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.2
-0.2
+0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.4
-0.1
-0.2
+0.0
growth on ypd
YPD
-0.1
-0.3
+0.3
+0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.3
-0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.6
-0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
-0.2
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.2
-0.0
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.7
-0.0
-0.1
+0.3
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