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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11494 and 11495 are separated by 27 nucleotides
11495 and 11496 are separated by 89 nucleotides
11496 and 11497 are separated by 227 nucleotides
11497 and 11498 are separated by 1086 nucleotides
mRNA_3126: 11494 - KOG0019 Molecular chaperone (HSP90 family), at 380,662 to 381,306
11494
mRNA_3127: 11495 - K11984 SART1, HAF, SNU66 U4/U6.U5 tri-snRNP-associated protein 1, at 381,334 to 384,253
11495
mRNA_3128: 11496 - BLAST protein transporter [Pseudozyma hubeiensis SY62], at 384,343 to 385,202
11496
mRNA_3129: 11497 - KOG4090 Uncharacterized conserved protein, at 385,430 to 386,354
11497
mRNA_3130: 11498 - KOG2109 WD40 repeat protein, at 387,441 to 391,334
11498
Group
Condition
mRNA
_3126
mRNA
_3127
mRNA
_3128
mRNA
_3129
mRNA
_3130
11494
11495
11496
11497
11498
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.2
-0.2
-0.5
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
-0.2
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
-0.1
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.3
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.0
-0.1
-0.3
+0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
-0.1
-0.0
+0.1
auxotrophy
Dropout Complete
+0.0
-0.1
-0.1
-0.1
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.2
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
+0.0
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
-0.1
-0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
+0.2
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.0
+0.0
-0.2
+0.2
auxotrophy
YNB Glucose
-0.1
-0.1
-0.1
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.0
-0.2
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.0
+0.4
-0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
+0.1
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
+0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
+0.3
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
+0.3
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.0
+0.4
-0.1
+0.3
growth on ypd
YPD
+0.3
+0.1
+0.2
+0.2
+0.2
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