Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11495 and 11496 are separated by 89 nucleotides11496 and 11497 are separated by 227 nucleotides11497 and 11498 are separated by 1086 nucleotides11498 and 11499 are separated by 306 nucleotides mRNA_3127: 11495 - K11984 SART1, HAF, SNU66 U4/U6.U5 tri-snRNP-associated protein 1, at 381,334 to 384,253 11495 mRNA_3128: 11496 - BLAST protein transporter [Pseudozyma hubeiensis SY62], at 384,343 to 385,202 11496 mRNA_3129: 11497 - KOG4090 Uncharacterized conserved protein, at 385,430 to 386,354 11497 mRNA_3130: 11498 - KOG2109 WD40 repeat protein, at 387,441 to 391,334 11498 mRNA_3131: 11499 - KOG1230 Protein containing repeated kelch motifs, at 391,641 to 394,728 11499
Group Condition mRNA_3127 mRNA_3128 mRNA_3129 mRNA_3130 mRNA_3131
11495 11496 11497 11498 11499
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 -0.5 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.3 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -0.5 +0.2 -0.2
auxotrophy Dropout Complete -0.1 -0.1 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 +0.2 +0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.1 -0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.0 -0.2 +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.2 +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.3 +0.0 -0.1 -0.4
growth on oleic acid YNB Glucose -0.1 -0.2 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.0 -0.1 +0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.0 +0.0 +0.1
auxotrophy YNB Glucose -0.1 -0.1 +0.2 -0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.0 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 -0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.4 -0.1 +0.3 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 +0.0 +0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.2 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.4 -0.0 +0.1 +0.2
growth on ypd YPD +0.1 +0.2 +0.2 +0.2 -0.0
remove
mRNA_3127
plot
remove
mRNA_3128
plot
remove
mRNA_3129
remove
mRNA_3130
plot
remove
mRNA_3131
plot