Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11498 and 11499 are separated by 306 nucleotides11499 and 11500 are separated by 160 nucleotides11500 and 11501 are separated by 168 nucleotides11501 and 11502 are separated by 75 nucleotides mRNA_3130: 11498 - KOG2109 WD40 repeat protein, at 387,441 to 391,334 11498 mRNA_3131: 11499 - KOG1230 Protein containing repeated kelch motifs, at 391,641 to 394,728 11499 mRNA_3132: 11500 - Hypothetical Protein, at 394,889 to 395,179 11500 mRNA_3133: 11501 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 395,348 to 397,742 11501 mRNA_3134: 11502 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 397,818 to 398,852 11502
Group Condition mRNA_3130 mRNA_3131 mRNA_3132 mRNA_3133 mRNA_3134
11498 11499 11500 11501 11502
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.6 -0.8 -0.1 -0.2
auxotrophy Dropout Complete -0.1 -0.2 -0.7 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 -0.9 +0.5 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 -0.8 +0.4 +0.0
auxotrophy YNB Glucose -0.1 -0.0 -0.8 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 -0.2 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 +0.0 +0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.2 -0.3 +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 -0.4 +0.4 -0.1
growth on oleic acid YNB Glucose +0.1 +0.1 +0.0 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 +0.9 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.1 +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 +0.8 -0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.3 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.6 -0.1 +0.1
growth on ypd YPD +0.2 -0.0 +0.5 +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.9 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.4 +1.0 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 +0.7 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 +0.8 +0.3 -0.1
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