Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11499 and 11500 are separated by 160 nucleotides
11500 and 11501 are separated by 168 nucleotides
11501 and 11502 are separated by 75 nucleotides
11502 and 11503 are separated by 669 nucleotides
mRNA_3131: 11499 - KOG1230 Protein containing repeated kelch motifs, at 391,641 to 394,728
11499
mRNA_3132: 11500 - Hypothetical Protein, at 394,889 to 395,179
11500
mRNA_3133: 11501 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 395,348 to 397,742
11501
mRNA_3134: 11502 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 397,818 to 398,852
11502
mRNA_3135: 11503 - HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474, at 399,522 to 400,301
11503
Group
Condition
mRNA
_3131
mRNA
_3132
mRNA
_3133
mRNA
_3134
mRNA
_3135
11499
11500
11501
11502
11503
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.8
-0.1
-0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.2
-0.2
-0.2
-1.1
auxotrophy
Dropout Complete
-0.2
-0.7
+0.1
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.9
+0.5
-0.0
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.0
+0.2
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.3
+0.2
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.4
+0.4
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.1
+0.1
-0.1
+0.4
auxotrophy
YNB Glucose
-0.0
-0.8
+0.5
-0.2
+0.4
growth on oleic acid
YNB Glucose
+0.1
+0.0
-0.0
-0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.8
+0.4
+0.0
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+1.0
+0.0
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.9
+0.2
-0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.1
+0.3
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.8
-0.3
-0.2
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.7
-0.1
+0.0
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.6
-0.1
+0.1
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.9
-0.2
+0.2
+0.2
growth on ypd
YPD
-0.0
+0.5
+0.2
-0.0
+0.5
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
+0.3
-0.1
+1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.8
+0.3
-0.1
+0.8
remove
mRNA_3131
plot
remove
mRNA_3132
plot
remove
mRNA_3133
remove
mRNA_3134
plot
remove
mRNA_3135
plot