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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11500 and 11501 are separated by 168 nucleotides
11501 and 11502 are separated by 75 nucleotides
11502 and 11503 are separated by 669 nucleotides
11503 and 11504 are separated by 1189 nucleotides
mRNA_3132: 11500 - Hypothetical Protein, at 394,889 to 395,179
11500
mRNA_3133: 11501 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 395,348 to 397,742
11501
mRNA_3134: 11502 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 397,818 to 398,852
11502
mRNA_3135: 11503 - HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474, at 399,522 to 400,301
11503
mRNA_3136: 11504 - KOG2615 Permease of the major facilitator superfamily, at 401,491 to 407,249
11504
Group
Condition
mRNA
_3132
mRNA
_3133
mRNA
_3134
mRNA
_3135
mRNA
_3136
11500
11501
11502
11503
11504
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.2
-0.2
-1.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.1
-0.2
+0.0
+0.1
auxotrophy
Dropout Complete
-0.7
+0.1
-0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.9
+0.5
-0.0
+0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.2
-0.2
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.4
-0.1
+0.0
-0.1
auxotrophy
YNB Glucose
-0.8
+0.5
-0.2
+0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.2
-0.2
+0.1
+0.1
growth on oleic acid
YNB Glucose
+0.0
-0.0
-0.0
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
-0.1
+0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
+0.4
+0.0
+0.8
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.3
+0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-0.3
-0.2
+0.5
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.7
-0.1
+0.0
+0.4
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.9
-0.2
+0.2
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
+0.2
-0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.0
+0.0
+0.0
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.6
-0.1
+0.1
+0.5
+0.0
growth on ypd
YPD
+0.5
+0.2
-0.0
+0.5
+0.1
growth on ricinoleic acid
YNB Glucose
+0.3
+0.3
-0.1
+1.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.8
+0.3
-0.1
+0.8
+0.1
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