Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11501 and 11502 are separated by 75 nucleotides
11502 and 11503 are separated by 669 nucleotides
11503 and 11504 are separated by 1189 nucleotides
11504 and 11505 are separated by 482 nucleotides
mRNA_3133: 11501 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 395,348 to 397,742
11501
mRNA_3134: 11502 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 397,818 to 398,852
11502
mRNA_3135: 11503 - HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474, at 399,522 to 400,301
11503
mRNA_3136: 11504 - KOG2615 Permease of the major facilitator superfamily, at 401,491 to 407,249
11504
mRNA_3137: 11505 - SUPERFAMILY--SSF48208, at 407,732 to 408,630
11505
Group
Condition
mRNA
_3133
mRNA
_3134
mRNA
_3135
mRNA
_3136
mRNA
_3137
11501
11502
11503
11504
11505
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.2
-1.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
+0.0
+0.1
-0.5
auxotrophy
Dropout Complete
+0.1
-0.1
+0.1
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.2
-0.1
-0.0
-0.1
growth on oleic acid
YNB Glucose
-0.0
-0.0
+0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.2
+0.5
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.3
+0.3
-0.0
-0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.1
+0.0
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.2
+0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.0
-0.0
+0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.2
+0.1
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
+0.4
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.1
+0.4
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
+0.1
+0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
+0.5
+0.0
-0.3
auxotrophy
YNB Glucose
+0.5
-0.2
+0.4
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.0
+0.3
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
+0.8
+0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.0
+0.8
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
+0.3
-0.1
+1.0
+0.1
-0.3
growth on ypd
YPD
+0.2
-0.0
+0.5
+0.1
+0.3
remove
mRNA_3133
plot
remove
mRNA_3134
plot
remove
mRNA_3135
remove
mRNA_3136
plot
remove
mRNA_3137
plot