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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11508 and 11509 are separated by 63 nucleotides
11509 and 11510 are separated by 1045 nucleotides
11510 and 11511 are separated by 81 nucleotides
11511 and 11512 are separated by 167 nucleotides
mRNA_3140: 11508 - BLAST peptide release factor [Melanopsichium pennsylvanicum 4], at 411,347 to 412,227
11508
mRNA_3141: 11509 - HMMPfam-Proline-rich nuclear receptor coactivator-PF15365, at 412,291 to 413,595
11509
mRNA_3142: 11510 - K14663 NTA1 protein N-terminal amidase, at 414,641 to 415,857
11510
mRNA_3143: 11511 - K10133 TP53I3 tumor protein p53-inducible protein 3, at 415,939 to 417,358
11511
mRNA_3144: 11512 - Hypothetical Protein, at 417,526 to 421,368
11512
Group
Condition
mRNA
_3140
mRNA
_3141
mRNA
_3142
mRNA
_3143
mRNA
_3144
11508
11509
11510
11511
11512
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.2
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
-0.3
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.2
-0.0
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.3
-0.3
-0.2
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.1
+0.1
-0.6
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.2
-0.0
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
+0.0
-0.1
-0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.1
-0.1
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.1
+0.1
-0.3
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.0
+0.0
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
-0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.1
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.2
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.1
-0.1
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.1
+0.1
-0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
+0.1
-0.1
-0.0
auxotrophy
Dropout Complete
+0.2
+0.0
+0.1
-0.0
+0.1
growth on ypd
YPD
-0.0
+0.3
+0.0
-0.0
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.1
+0.1
+0.3
+0.2
auxotrophy
YNB Glucose
+0.3
+0.2
+0.2
+0.1
+0.0
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