Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11509 and 11510 are separated by 1045 nucleotides
11510 and 11511 are separated by 81 nucleotides
11511 and 11512 are separated by 167 nucleotides
11512 and 11513 are separated by 996 nucleotides
mRNA_3141: 11509 - HMMPfam-Proline-rich nuclear receptor coactivator-PF15365, at 412,291 to 413,595
11509
mRNA_3142: 11510 - K14663 NTA1 protein N-terminal amidase, at 414,641 to 415,857
11510
mRNA_3143: 11511 - K10133 TP53I3 tumor protein p53-inducible protein 3, at 415,939 to 417,358
11511
mRNA_3144: 11512 - Hypothetical Protein, at 417,526 to 421,368
11512
mRNA_3145: 11513 - HMMPfam-haloacid dehalogenase-like hydrolase-PF08282,SUPERFAMILY--SSF56784,TIGRFAM-Cof-subfamily Cof-like hydrolase-TIGR00099,TIGRFAM-HAD-SF-IIB HAD hydrolase, family IIB-TIGR01484, at 422,365 to 423,654
11513
Group
Condition
mRNA
_3141
mRNA
_3142
mRNA
_3143
mRNA
_3144
mRNA
_3145
11509
11510
11511
11512
11513
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
+0.1
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
-0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
-0.6
-0.0
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.3
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
+0.2
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.0
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.2
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.0
-0.0
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
-0.2
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
-0.0
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
-0.0
-0.1
-0.1
auxotrophy
Dropout Complete
+0.0
+0.1
-0.0
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.1
-0.1
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
-0.3
+0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.1
-0.1
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
-0.3
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.0
+0.1
-0.2
+0.0
auxotrophy
YNB Glucose
+0.2
+0.2
+0.1
+0.0
-0.2
growth on ypd
YPD
+0.3
+0.0
-0.0
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.1
+0.3
+0.2
-0.1
remove
mRNA_3141
plot
remove
mRNA_3142
plot
remove
mRNA_3143
remove
mRNA_3144
plot
remove
mRNA_3145
plot