Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11512 and 11513 are separated by 996 nucleotides11513 and 11514 are separated by 138 nucleotides11514 and 11515 are separated by 347 nucleotides11515 and 11516 are separated by 928 nucleotides mRNA_3144: 11512 - Hypothetical Protein, at 417,526 to 421,368 11512 mRNA_3145: 11513 - HMMPfam-haloacid dehalogenase-like hydrolase-PF08282,SUPERFAMILY--SSF56784,TIGRFAM-Cof-subfamily Cof-like hydrolase-TIGR00099,TIGRFAM-HAD-SF-IIB HAD hydrolase, family IIB-TIGR01484, at 422,365 to 423,654 11513 mRNA_3146: 11514 - K11273 DDX11, CHL1, CTF1 chromosome transmission fidelity protein 1, at 423,793 to 427,312 11514 mRNA_3147: 11515 - Hypothetical Protein, at 427,660 to 428,214 11515 mRNA_3148: 11516 - BLAST putative fungal-specific transcription factor [Tricho..., at 429,143 to 430,117 11516
Group Condition mRNA_3144 mRNA_3145 mRNA_3146 mRNA_3147 mRNA_3148
11512 11513 11514 11515 11516
growth on oleic acid YNB Glucose -0.1 -0.1 -0.1 -0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.2 -0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 +0.1 -0.7 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.3 -0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.0 -0.6 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.0 -0.1 +0.2 -0.5
auxotrophy Dropout Complete +0.1 -0.3 -0.1 -0.6 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 +0.1 -0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.0 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 +0.0 -0.2 +0.2
auxotrophy YNB Glucose +0.0 -0.2 +0.2 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.2 +0.0 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.0 -0.1 +0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +0.0 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 +0.4 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 +0.2 -0.2 +0.4
growth on ricinoleic acid YNB Glucose +0.0 -0.0 +0.2 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.1 +0.4 +0.2
growth on ypd YPD +0.2 -0.0 +0.3 +0.1 +0.1
remove
mRNA_3144
plot
remove
mRNA_3145
plot
remove
mRNA_3146
remove
mRNA_3147
plot
remove
mRNA_3148
plot