Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11516 and 11517 are separated by 769 nucleotides11517 and 11518 are separated by 610 nucleotides11518 and 11519 are separated by 159 nucleotides11519 and 11520 are separated by 670 nucleotides mRNA_3148: 11516 - BLAST putative fungal-specific transcription factor [Tricho..., at 429,143 to 430,117 11516 mRNA_3149: 11517 - K17917 SNX1_2 sorting nexin-1/2, at 430,887 to 434,419 11517 mRNA_3150: 11518 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 435,030 to 436,321 11518 mRNA_3151: 11519 - Hypothetical Protein, at 436,481 to 438,109 11519 mRNA_3152: 11520 - Interpro PET assembly of cytochrome c oxidase, mitochondrial, at 438,780 to 439,151 11520
Group Condition mRNA_3148 mRNA_3149 mRNA_3150 mRNA_3151 mRNA_3152
11516 11517 11518 11519 11520
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2 -0.1 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.0 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 +0.1 +0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 +0.2 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 -0.0 +0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 +0.2 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.1 -0.2 -0.1 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.0 -0.0 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.0 -0.1 -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.1 +0.0 +0.0
growth on oleic acid YNB Glucose -0.2 -0.1 +0.3 -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.1 -0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.2 -0.1 +0.2
auxotrophy YNB Glucose +0.2 -0.2 +0.3 -0.1 -0.0
auxotrophy Dropout Complete +0.3 -0.1 +0.2 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.1 +0.2 -0.2 -0.2
growth on ypd YPD +0.1 -0.1 +0.1 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.0 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.1 -0.0 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.0 +0.1 +0.0 +0.4
remove
mRNA_3148
plot
remove
mRNA_3149
plot
remove
mRNA_3150
remove
mRNA_3151
plot
remove
mRNA_3152
plot