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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11518 and 11519 are separated by 159 nucleotides
11519 and 11520 are separated by 670 nucleotides
11520 and 11521 are separated by 230 nucleotides
11521 and 11522 are separated by 295 nucleotides
mRNA_3150: 11518 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 435,030 to 436,321
11518
mRNA_3151: 11519 - Hypothetical Protein, at 436,481 to 438,109
11519
mRNA_3152: 11520 - Interpro PET assembly of cytochrome c oxidase, mitochondrial, at 438,780 to 439,151
11520
mRNA_3153: 11521 - BLAST serine proline rich protein [Moniliophthora rorer..., at 439,382 to 440,661
11521
mRNA_3154: 11522 - K14831 MAK16 protein MAK16, at 440,957 to 442,475
11522
Group
Condition
mRNA
_3150
mRNA
_3151
mRNA
_3152
mRNA
_3153
mRNA
_3154
11518
11519
11520
11521
11522
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
+0.3
-0.8
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.2
-0.3
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.0
-0.4
+0.2
-0.4
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.1
-0.5
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.2
-0.2
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.0
+0.0
-0.5
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
+0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.1
-0.3
-0.0
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.0
+0.4
-0.5
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.1
-0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
+0.5
-0.6
-0.1
growth on oleic acid
YNB Glucose
+0.3
-0.0
+0.0
-0.3
-0.1
auxotrophy
YNB Glucose
+0.3
-0.1
-0.0
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
+0.1
+0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
+0.1
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.0
-0.1
-0.4
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
+0.0
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
+0.2
-0.3
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.6
-0.3
+0.2
growth on ypd
YPD
+0.1
+0.1
+0.2
-0.0
-0.1
auxotrophy
Dropout Complete
+0.2
-0.0
-0.1
+0.2
+0.0
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