Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11518 and 11519 are separated by 159 nucleotides11519 and 11520 are separated by 670 nucleotides11520 and 11521 are separated by 230 nucleotides11521 and 11522 are separated by 295 nucleotides mRNA_3150: 11518 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 435,030 to 436,321 11518 mRNA_3151: 11519 - Hypothetical Protein, at 436,481 to 438,109 11519 mRNA_3152: 11520 - Interpro PET assembly of cytochrome c oxidase, mitochondrial, at 438,780 to 439,151 11520 mRNA_3153: 11521 - BLAST serine proline rich protein [Moniliophthora rorer..., at 439,382 to 440,661 11521 mRNA_3154: 11522 - K14831 MAK16 protein MAK16, at 440,957 to 442,475 11522
Group Condition mRNA_3150 mRNA_3151 mRNA_3152 mRNA_3153 mRNA_3154
11518 11519 11520 11521 11522
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.3 -0.8 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 -0.3 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.0 -0.4 +0.2 -0.4
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.1 -0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.2 -0.2 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.0 +0.0 -0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 -0.3 -0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 +0.4 -0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 -0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 +0.5 -0.6 -0.1
growth on oleic acid YNB Glucose +0.3 -0.0 +0.0 -0.3 -0.1
auxotrophy YNB Glucose +0.3 -0.1 -0.0 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 +0.1 +0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 -0.1 -0.4 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 +0.0 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.2 -0.1 +0.2 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 +0.6 -0.3 +0.2
growth on ypd YPD +0.1 +0.1 +0.2 -0.0 -0.1
auxotrophy Dropout Complete +0.2 -0.0 -0.1 +0.2 +0.0
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