Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11520 and 11521 are separated by 230 nucleotides11521 and 11522 are separated by 295 nucleotides11522 and 11523 are separated by 1324 nucleotides11523 and 11524 are separated by 619 nucleotides mRNA_3152: 11520 - Interpro PET assembly of cytochrome c oxidase, mitochondrial, at 438,780 to 439,151 11520 mRNA_3153: 11521 - BLAST serine proline rich protein [Moniliophthora rorer..., at 439,382 to 440,661 11521 mRNA_3154: 11522 - K14831 MAK16 protein MAK16, at 440,957 to 442,475 11522 mRNA_3155: 11523 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550, at 443,800 to 447,457 11523 mRNA_3156: 11524 - K12662 PRPF4, PRP4 U4/U6 small nuclear ribonucleoprotein PRP4, at 448,077 to 450,028 11524
Group Condition mRNA_3152 mRNA_3153 mRNA_3154 mRNA_3155 mRNA_3156
11520 11521 11522 11523 11524
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 -0.4 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.8 -0.5 +0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.5 -0.3 -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 +0.2 +0.2 -0.3
growth on oleic acid YNB Glucose +0.0 -0.3 -0.1 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 -0.2 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.6 -0.1 +0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.3 +0.2 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.4 +0.3 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.2 -0.1 +0.1
auxotrophy YNB Glucose -0.0 -0.1 -0.2 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.5 -0.3 +0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 +0.0 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.2 -0.3 +0.1 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 -0.0 +0.1 -0.2
growth on ypd YPD +0.2 -0.0 -0.1 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.5 +0.3 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.1 +0.0 +0.2
auxotrophy Dropout Complete -0.1 +0.2 +0.0 +0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 +0.1 +0.3 +0.1
remove
mRNA_3152
plot
remove
mRNA_3153
plot
remove
mRNA_3154
remove
mRNA_3155
plot
remove
mRNA_3156
plot