Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11522 and 11523 are separated by 1324 nucleotides11523 and 11524 are separated by 619 nucleotides11524 and 11525 are separated by 97 nucleotides11525 and 11526 are separated by 338 nucleotides mRNA_3154: 11522 - K14831 MAK16 protein MAK16, at 440,957 to 442,475 11522 mRNA_3155: 11523 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550, at 443,800 to 447,457 11523 mRNA_3156: 11524 - K12662 PRPF4, PRP4 U4/U6 small nuclear ribonucleoprotein PRP4, at 448,077 to 450,028 11524 mRNA_3157: 11525 - K00942 E2.7.4.8, gmk guanylate kinase, at 450,126 to 451,000 11525 mRNA_3158: 11526 - KOG0453 Aconitase/homoaconitase (aconitase superfamily), at 451,339 to 452,325 11526
Group Condition mRNA_3154 mRNA_3155 mRNA_3156 mRNA_3157 mRNA_3158
11522 11523 11524 11525 11526
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 -0.3 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 +0.1 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.0 -0.2 -0.0
growth on oleic acid YNB Glucose -0.1 -0.0 -0.1 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 -0.2 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.2 -0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 +0.1 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 -0.2 +0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.3 -0.0 +0.1 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.1 -0.4 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -0.0 -0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 +0.0 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.2 +0.2 -0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.2 -0.3 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.1 -0.1 -0.4
growth on ypd YPD -0.1 +0.0 -0.0 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.0 -0.1 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 +0.0 +0.4 +0.1
auxotrophy YNB Glucose -0.2 +0.1 +0.1 +0.5 -0.1
auxotrophy Dropout Complete +0.0 +0.3 -0.0 +0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 +0.1 +0.4 +0.1
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