Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11522 and 11523 are separated by 1324 nucleotides
11523 and 11524 are separated by 619 nucleotides
11524 and 11525 are separated by 97 nucleotides
11525 and 11526 are separated by 338 nucleotides
mRNA_3154: 11522 - K14831 MAK16 protein MAK16, at 440,957 to 442,475
11522
mRNA_3155: 11523 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550, at 443,800 to 447,457
11523
mRNA_3156: 11524 - K12662 PRPF4, PRP4 U4/U6 small nuclear ribonucleoprotein PRP4, at 448,077 to 450,028
11524
mRNA_3157: 11525 - K00942 E2.7.4.8, gmk guanylate kinase, at 450,126 to 451,000
11525
mRNA_3158: 11526 - KOG0453 Aconitase/homoaconitase (aconitase superfamily), at 451,339 to 452,325
11526
Group
Condition
mRNA
_3154
mRNA
_3155
mRNA
_3156
mRNA
_3157
mRNA
_3158
11522
11523
11524
11525
11526
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.4
-0.3
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
+0.1
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
+0.0
-0.2
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.0
-0.1
+0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.1
-0.2
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
+0.2
-0.3
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
+0.1
-0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.2
-0.2
+0.1
+0.3
growth on ricinoleic acid
YNB Glucose
-0.3
-0.0
+0.1
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
+0.1
-0.4
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.0
-0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.2
+0.0
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+0.2
+0.2
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.2
-0.3
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.1
+0.1
-0.1
-0.4
growth on ypd
YPD
-0.1
+0.0
-0.0
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.0
-0.1
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
+0.0
+0.4
+0.1
auxotrophy
YNB Glucose
-0.2
+0.1
+0.1
+0.5
-0.1
auxotrophy
Dropout Complete
+0.0
+0.3
-0.0
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
+0.1
+0.4
+0.1
remove
mRNA_3154
plot
remove
mRNA_3155
plot
remove
mRNA_3156
remove
mRNA_3157
plot
remove
mRNA_3158
plot