Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11523 and 11524 are separated by 619 nucleotides11524 and 11525 are separated by 97 nucleotides11525 and 11526 are separated by 338 nucleotides11526 and 11527 are separated by 67 nucleotides mRNA_3155: 11523 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550, at 443,800 to 447,457 11523 mRNA_3156: 11524 - K12662 PRPF4, PRP4 U4/U6 small nuclear ribonucleoprotein PRP4, at 448,077 to 450,028 11524 mRNA_3157: 11525 - K00942 E2.7.4.8, gmk guanylate kinase, at 450,126 to 451,000 11525 mRNA_3158: 11526 - KOG0453 Aconitase/homoaconitase (aconitase superfamily), at 451,339 to 452,325 11526 mRNA_3159: 11527 - K15437 AIMP1, ARC1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1, at 452,393 to 454,134 11527
Group Condition mRNA_3155 mRNA_3156 mRNA_3157 mRNA_3158 mRNA_3159
11523 11524 11525 11526 11527
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -0.0 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 -0.1 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 -0.2 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -0.1 +0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 +0.3 -0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.0 -0.3 +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.3 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.4 -0.1 +0.1
growth on oleic acid YNB Glucose -0.0 -0.1 +0.0 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 +0.1 +0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.2 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.1 -0.0 +0.1
growth on ricinoleic acid YNB Glucose -0.0 +0.1 +0.1 -0.0 -0.0
growth on ypd YPD +0.0 -0.0 +0.3 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.0 -0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 +0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 -0.0 +0.2 -0.0
auxotrophy Dropout Complete +0.3 -0.0 +0.3 -0.0 -0.0
auxotrophy YNB Glucose +0.1 +0.1 +0.5 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.4 +0.1 +0.0
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