Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11545 and 11546 are separated by 468 nucleotides
11546 and 11547 are separated by 243 nucleotides
11547 and 11548 are separated by 795 nucleotides
11548 and 11549 are separated by 332 nucleotides
mRNA_3177: 11545 - KOG2164 Predicted E3 ubiquitin ligase, at 22,085 to 24,622
11545
mRNA_3178: 11546 - KOG4561 Uncharacterized conserved protein, contains TBC domain, at 25,091 to 26,696
11546
mRNA_3179: 11547 - Hypothetical Protein, at 26,940 to 28,412
11547
mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29,208 to 30,655
11548
mRNA_3181: 11549 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 30,988 to 32,695
11549
Group
Condition
mRNA
_3177
mRNA
_3178
mRNA
_3179
mRNA
_3180
mRNA
_3181
11545
11546
11547
11548
11549
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.5
N.D.
-0.3
-0.0
growth on oleic acid
YNB Oleic Acid
-0.4
+0.2
N.D.
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
N.D.
-0.3
+0.4
growth on oleic acid
YNB Glucose
-0.4
+0.0
N.D.
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.3
N.D.
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
N.D.
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.7
N.D.
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.2
N.D.
-0.2
+0.1
growth on ypd
YPD
-0.3
+0.4
N.D.
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
-0.0
+0.2
auxotrophy
YNB Glucose
-0.2
+0.3
N.D.
-0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
+0.3
N.D.
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
N.D.
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
N.D.
-0.1
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.0
N.D.
+0.4
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.5
N.D.
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
N.D.
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
N.D.
+0.1
+0.4
growth on ricinoleic acid
YNB Glucose
-0.2
+0.4
N.D.
+0.3
+0.2
auxotrophy
Dropout Complete
-0.2
+0.1
N.D.
+0.2
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.6
N.D.
+0.3
+0.3
remove
mRNA_3177
plot
remove
mRNA_3178
plot
remove
mRNA_3179
remove
mRNA_3180
plot
remove
mRNA_3181
plot