Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11545 and 11546 are separated by 468 nucleotides11546 and 11547 are separated by 243 nucleotides11547 and 11548 are separated by 795 nucleotides11548 and 11549 are separated by 332 nucleotides mRNA_3177: 11545 - KOG2164 Predicted E3 ubiquitin ligase, at 22,085 to 24,622 11545 mRNA_3178: 11546 - KOG4561 Uncharacterized conserved protein, contains TBC domain, at 25,091 to 26,696 11546 mRNA_3179: 11547 - Hypothetical Protein, at 26,940 to 28,412 11547 mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29,208 to 30,655 11548 mRNA_3181: 11549 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 30,988 to 32,695 11549
Group Condition mRNA_3177 mRNA_3178 mRNA_3179 mRNA_3180 mRNA_3181
11545 11546 11547 11548 11549
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 N.D. -0.3 -0.0
growth on oleic acid YNB Oleic Acid -0.4 +0.2 N.D. -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 N.D. -0.3 +0.4
growth on oleic acid YNB Glucose -0.4 +0.0 N.D. -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.3 N.D. -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.3 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.7 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.2 N.D. -0.2 +0.1
growth on ypd YPD -0.3 +0.4 N.D. -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 N.D. -0.0 +0.2
auxotrophy YNB Glucose -0.2 +0.3 N.D. -0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.3 N.D. +0.4 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.1 N.D. -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.3 N.D. -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.0 N.D. +0.4 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.5 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 N.D. +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 N.D. +0.1 +0.4
growth on ricinoleic acid YNB Glucose -0.2 +0.4 N.D. +0.3 +0.2
auxotrophy Dropout Complete -0.2 +0.1 N.D. +0.2 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.6 N.D. +0.3 +0.3
remove
mRNA_3177
plot
remove
mRNA_3178
plot
remove
mRNA_3179
remove
mRNA_3180
plot
remove
mRNA_3181
plot