Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11546 and 11547 are separated by 243 nucleotides11547 and 11548 are separated by 795 nucleotides11548 and 11549 are separated by 332 nucleotides11549 and 11550 are separated by 476 nucleotides mRNA_3178: 11546 - KOG4561 Uncharacterized conserved protein, contains TBC domain, at 25,091 to 26,696 11546 mRNA_3179: 11547 - Hypothetical Protein, at 26,940 to 28,412 11547 mRNA_3180: 11548 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,SUPERFAMILY--SSF90209, at 29,208 to 30,655 11548 mRNA_3181: 11549 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 30,988 to 32,695 11549 mRNA_3182: 11550 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 33,172 to 34,723 11550
Group Condition mRNA_3178 mRNA_3179 mRNA_3180 mRNA_3181 mRNA_3182
11546 11547 11548 11549 11550
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. -0.3 -0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. -0.0 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.1 +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. -0.1 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.0 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 N.D. +0.2 +0.2 +0.1
growth on oleic acid YNB Glucose +0.0 N.D. -0.0 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.3 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.2 +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 +0.1 +0.0
growth on ypd YPD +0.4 N.D. -0.0 -0.1 +0.1
auxotrophy YNB Glucose +0.3 N.D. -0.0 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.4 +0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. -0.1 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.3 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.1 +0.4 +0.1
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.3 +0.2 +0.0
auxotrophy Dropout Complete +0.1 N.D. +0.2 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.4 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. +0.2 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.6 N.D. +0.3 +0.3 +0.1
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